Publications

2025

1. Nature Methods

   

   CryoDRGN-AI: Neural Ab Initio Reconstruction of Challenging Cryo-EM and Cryo-ET Datasets

   Axel Levy, Rishwanth Raghu, Ryan Feathers, and 7 more authors

   Nature Methods, 2025

   Bib HTML Code

   @article{levy2025cryodrgnai,
     title = {CryoDRGN-AI: Neural Ab Initio Reconstruction of Challenging Cryo-EM and Cryo-ET Datasets},
     author = {Levy, Axel and Raghu, Rishwanth and Feathers, Ryan and Grzadkowski, Michal and Poitevin, Fr{\'e}d{\'e}ric and Johnston, Jenny and Vallese, Francesca and Clarke, Oliver and Wetzstein, Gordon and Zhong, Ellen},
     journal = {Nature Methods},
     year = {2025},
   }

2. NeurIPS

   

   Multiscale guidance of protein structure prediction with heterogeneous cryo-EM data

   Rishwanth Raghu, Axel Levy, Gordon Wetzstein, and 1 more author

   Advances in Neural Information Processing Systems, 2025

   Bib HTML Code

   @article{raghu2025cryoboltz,
     title = {Multiscale guidance of protein structure prediction with heterogeneous cryo-EM data},
     author = {Raghu, Rishwanth and Levy, Axel and Wetzstein, Gordon and Zhong, Ellen},
     journal = {Advances in Neural Information Processing Systems},
     year = {2025},
   }

2024

1. NeurIPS

   

   Mixture of Neural Fields for Heterogeneous Reconstruction in Cryo-EM

   Axel Levy, Rishwanth Raghu, David Shustin, and 5 more authors

   In Advances in Neural Information Processing Systems, 2024

   Bib

   @inproceedings{levy2024mixture,
     title = {Mixture of Neural Fields for Heterogeneous Reconstruction in Cryo-EM},
     author = {Levy, Axel and Raghu, Rishwanth and Shustin, David and Peng, Adele and Li, Huan and Clarke, Oliver and Wetzstein, Gordon and Zhong, Ellen},
     booktitle = {Advances in Neural Information Processing Systems},
     year = {2024},
   }

2. 3DV (Spotlight)

   

   MELON: NeRF with Unposed Images in SO(3)

   Axel Levy^*, Mark Matthews^*, Matan Sela, and 2 more authors

   In International Conference on 3D Vision, 2024

   Bib HTML

   @inproceedings{levy2024melon,
     title = {{MELON}: {NeRF} with Unposed Images in {SO(3)}},
     author = {Levy, Axel and Matthews, Mark and Sela, Matan and Wetzstein, Gordon and Lagun, Dmitry},
     booktitle = {International Conference on 3D Vision},
     year = {2024},
   }

2022

1. NeurIPS

   

   Amortized Inference for Heterogeneous Reconstruction in Cryo-EM

   Axel Levy, Gordon Wetzstein, Julien Martel, and 2 more authors

   In Advances in Neural Information Processing Systems, 2022

   Bib HTML Code

   @inproceedings{levy2022cryofire,
     title = {Amortized Inference for Heterogeneous Reconstruction in Cryo-{EM}},
     author = {Levy, Axel and Wetzstein, Gordon and Martel, Julien and Poitevin, Fr{\'e}d{\'e}ric and Zhong, Ellen},
     booktitle = {Advances in Neural Information Processing Systems},
     year = {2022},
   }

2. ECCV

   

   CryoAI: Amortized Inference of Poses for Ab Initio Reconstruction of 3D Molecular Volumes from Real Cryo-EM Images

   Axel Levy, Frédéric Poitevin, Julien Martel, and 6 more authors

   In European Conference on Computer Vision, 2022

   Bib Code

   @inproceedings{levy2022cryoai,
     title = {{CryoAI}: Amortized Inference of Poses for Ab Initio Reconstruction of {3D} Molecular Volumes from Real Cryo-{EM} Images},
     author = {Levy, Axel and Poitevin, Fr{\'e}d{\'e}ric and Martel, Julien and Nashed, Youssef and Peck, Ariana and Miolane, Nina and Ratner, Daniel and Dunne, Mike and Wetzstein, Gordon},
     booktitle = {European Conference on Computer Vision},
     year = {2022},
   }